ABBYY FineReader does very good job when it comes to optical recognition. Probably the best on the market. And it can also export to *.csv, among many other formats. The downside is, it is not free and this particular version works on Windows only.
A different version for macOS exists, but it lacks many features and overall slower (subjectively) that a version for Windows. Earlier versions of FineReader are also known to work on Linux via Wine, though also being rather unstable.
Here is a program screenshot with your data:
That's is the result:
Journal Abbreviation,NlmlD,Y ear Added to MTIFL
AIDS Educ Prev,9002873,2016
AIDS Patient Care STDS,9607225,2016
AJNR Am J Neuroradiol,8003708,2015
Acad Emerg Med,9418450,2014
Accid Anal Prev,1254476,2015
Acta Chir Iugosl,0372631,2015
Acta Clin Croat,9425483,2015
Acta Med Croatica,9208249,2015
Acta Med Iran,14540050R,2015
Acta Neurochir (Wien),0151000,2014
Acta Neurol Scand,0370336,2015
Acta Odontol Scand,0370344,2015
Acta Psychol (Amst),0370366,2013
Ageing Res Rev,101128963,2016
Aging Clin Exp Res,101132995,2015
Aliment Pharmacol Ther,8707234,2014
Am J Addict,9208821,2015
Am J Sports Med,7609541,2014
OCR itself took about 5 sec on an old Thinkpad laptop.